Thursday, October 24, 2013

First Week as Stem Intern! Unknown Bacteria "X" Mini Project

   This past week has been my first week as a STEM intern. I started Monday at noon and my journey began with some very long and informative safety videos. Although they were boring they are important and essential. After the videos I had to find out what an "isolation streak" and a "lawn streak" were. I then had to actually do an isolation and lawn streak with mystery bacteria #7 given to me by Josh. My first attempts on the streaks were not very good due to me literally stabbing the TSA. I tried it again and my second attempt were much better after Josh demonstrated how to do it properly. Drawing the “T” on the bottom of the dish really helped as well. I put my first and second attempts of streaks in the incubator for 24 hours to see my results.

These are my first and second attempts for the isolation streak. “T” definitely help
My second attempt (right) seemed to have grown some type of mold quite obviously.

On Tuesday I had to find out what a “gram stain” was and figure out how to do a gram stain on my unknown bacteria. So I found out that a gram stain is a way to figure out what type of cell wall (gram negative or gram positive) and shape the bacteria has to differentiate it from other bacteria to narrow down what type of bacteria it is. So the process was to grab a slide and put a drop of water on it. I then grabbed some bacteria and smeared it on the slide on the water. I got an oil lamp and heated the slide by passing it on top of the fire until the water dried up and left only the bacteria. After that I put a drop of crystal violet on the bacteria and left it for 30 seconds and rinsed it off with water. Next I covered the bacteria with Gram’s Iodine for one minute and rinsed. The decolorizer was next for 15-30 seconds and rinse. Last was the Safranin for about a minute and rinse off. Blot dry with the bibulous paper and finally put the slide under the microscope and look for the cell morphology. Mine turned out to be a gram positive coccus.

I had figured out that my cell morphology was coccus, which is circular shaped cells. I also found out through the gram stain that my unknown bacteria was gram positive since it was purple. From that information I followed the positive gram cocci chart and the next step was to do a catalase test. The catalase test purpose is to identify if the bacteria generates the enzyme catalase. I needed some hydrogen peroxide for this test. I grabbed a slide and made two circles one for the test and the other for control. I put a drop of distilled water on both circles and smeared some inoculum (bacteria). I put one or two drops of hydrogen peroxide on the Test circle and none on the control. The reason for this is to see if the hydrogen peroxide will make the bacteria bubble or not. If the bacteria does bubble then it means that it is catalase positive. The C circle is to compare with T circle.  My bacteria did bubble so it is catalase positive.


Now that the bacteria have been identified to have positive catalase enzymes, the next step is to do glucose fermentation. I simply transferred a few drops from by unknown bacteria tube to the glucose tube and put it in the incubator for 24 hours. The next day I grabbed my glucose tube from the incubator and saw that it turned bright yellow. This means that my bacteria is a positive acid and it did not produce any gas. Finally I did an MSA test today to see if my bacteria can withstand a high salt concentration environment. I did an isolated streak on an MSA medium today and placed it in the incubator for 24 hours. Next week I will check my results. Overall I have really enjoyed this mini project so far because it’s really “hands on” learning and it’s interesting to see how many test are done on a bacteria. The other interns seem really cool as well and seem to be enjoying their projects too.

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